1. D. Juretic, "A diagrammatic approach to the
polaron ground-state energy". Phys. stat. sol. (b) 47, K49-51 (1971).
2. M.S. Tomas, A.A. Lukas, M. Sunjic, and D. Juretic, "Coherent surface bremsstrahlung
in low-energy-electron diffraction and reflection high-energy-electron
diffraction". Phys. Rev. B 9, 1489-1498 (1974).
3. D. Juretic, "Cyanide-resistant respiration of a Neurospora crassa
membrane mutant". J. Bacteriol. 126, 542-543 (1976).
4. D. Juretic, "Lecithin requirement for the sporulation process in
Neurospora crassa". J. Bacteriol. 130, 524-525 (1977).
5. D. Juretic, "The effect of phosphatidylcholine depletion on biochemical
and physical properties of a Neurospora crassa membrane mutant". Biochim.
Biophys. Acta 469, 137-150 (1977). 6. D. Juretic, C. Motolla, and D. Romeo,
"The K+ requirement for phorbol 12-myristate 13-acetate stimulated O2
consumption by neutrophils". Period. biol. 83, 235-237 (1981).
7. D. Juretic and D. Kotnik-Karuza, "The fluorescent probe for the
membrane potential of red blood cells". Period. biol. 83, 156-158 (1981).
8. A. Alebic-Juretic and D. Juretic, "Cooperative effects in a kinetic
model of a light-driven proton pump". Period. biol. 83, 109-112 (1981).
9. D. Juretic and D. Kotnik-Karuza, "Calcium ionophore generation of
membrane depolarization in human leukocytes". Period. biol. 85, 137-138
(1983).
10. D. Juretic, "The thermodynamic and kinetic limits on the process of
free energy storage by photosynthetic systems". Croatica Chemica Acta 56,
383-387 (1983).
11. D. Juretic, "Efficiency of free energy transfer and entropy production
in photosynthetic systems". J. theor. biol. 106, 315-327 (1984).
12. D. Juretic, M.O. Kunic, O. Nikolic and M. Mastrovic, "The fluorescent
and infrared spectroscopy of oil samples after exposure to sea surface".
Rocc. News 13, 9-16 (1984).
13. D. Juretic and D. Kotnik-Karuza, "Inhibition of cancer-promotor caused
stimulation of human neutrophils by a proton ionophore". Period. biol. 87,
23-26 (1985).
14. D. Juretic, D. Kotnik-Karuza and A. Frkovic, "The accumulation of
3,3'- dipentyloxacarbocyanine by human cord blood leukocytes". Period.
biol. 87, 375-381 (1985).
15. P. Riccio, L. Masotti, P. Cavatorta, A. De Santis, D. Juretic, A. Bubba, I.
Pasquali-Ronchetti and E. Quaqliariello, "Myelin basic protein ability to
organize lipid bilayers: structural transition in bilayers of
lisophosphatidylcholine micelles". Biochem. Biophys. Res. Commun. 134, 313-319
(1986).
16. D. Kotnik-Karuza and D. Juretic, "Membrane potential measurements of
granule-free bovine neutrophiles". Studia Biophysica 112, 105-113 (1986).
17. D. Juretic and F. Sokolic, "Membrane potential as a coupling agent for
photophosphorylation by bacteriorhodopsin and ATP-ase containing artificial
membrane". Croatica Chemica Acta 59, 599-615 (1986).
18. D. Juretic and H.V. Westerhoff, "Variation of efficiency with
free-energy dissipation in biological energy transduction". Biophysical
Chemistry 28, 21-34 (1987).
19. R.W. Williams, A. Chang, D. Juretic and S. Loughran, "Secondary
structure predictions and medium range interactions". Biochim. Biophys.
Acta 916, 200-204 (1987). CC
20. D. Kotnik-Karuza, G. Pifat and D. Juretic, "Tryptophan - a protein fluorescent
probe in myelin-basic protein and low density lipoproteins". Jugoslav.
Med. Biokem. 7, 71-80 (1988).
21. D. Juretic, R.W. Hendler and H.V. Westerhoff, "Variation of efficiency
with free energy dissipation in theoretical models of oxidative phosphorylation
and cytochrome oxidase". In Integration of Mitochondrial Function
(Lemasters, J.J., Hackenbrock, C.R., Thurman, R.G., Westerhoff, H.W., eds.),
Plenum Press New York, 205-211 (1988).
22. P. Cavatorta, L. Masotti, A.G. Szabo, D. Juretic, P. Riccio, and E.
Quagliariello, "Fluorescence spectral resolution of myelin basic protein
conformers in complexes with lysophosphatidylcholine", Cell Biophysics 13,
201-215 (1988).
23. D. Juretic, H.-C. Chen, J.H. Brown, J.L. Morell, R.W. Hendler and H.V. Westerhoff,
"Magainin 2 amide and analogues. Antimicrobial activity, membrane
depolarization and susceptibility to proteolysis", FEBS Letters 249,
219-223, (1989).
24. H.V. Westerhoff, D. Juretic, R.W. Hendler and M. Zasloff, "Magainins
and the distruption of membrane-linked free-energy transduction", Proc.
Natl. Acad. Sci. USA 86, 6597-6601 (1989).
25. H.V. Westerhoff, R.W. Hendler, M. Zasloff and D. Juretic,
"Interactions between a new class of eukaryotic antimicrobial agents and
isolated rat liver mitochondria", Biochim. Biophys. Acta 975, 361-369
(1989).
26. D. Juretic, "Antimicrobial peptides of the magainin family: membrane
depolarization studies on E. coli and cytochrome oxidase liposomes",
Studia Biophysica 138, 79-86 (1990).
27. D. Juretic and R.W. Williams "Protein secondary structure preferences:
dependence on medium-range steric interactions" J. Math. Chem. 8, 229-242
(1991).
28. D. Juretic, "Damped oscillatory control of mitochondrial energy linked
processes observed in the presence of magainins" Period. biol. 93, 277-278
(1991).
29. D. Juretic, "Localizing -helices in water-soluble and membrane-bound
proteins". Period. biol. 93, 279-280 (1991).
30. D. Juretic, "Secondary structure of membrane proteins: Prediction with
conformational preference functions of soluble proteins". Croatica Chemica
Acta, 65, 921-932 (1992).
31. D. Juretic, "Membrane free-energy converters: The benefits of
intrinsic uncoupling and nonlinearity". Acta Pharmaceutica 42 , 373-376
(1992).
32. D. Juretic, B.K. Lee, N. Trinajstic and R.W. Williams, "Conformational
preference functions for predicting helices in membrane proteins".
Biopolymers 33, 255-273 (1993).
33. D. Juretic, N. Trinajstic and B. Lucic, "Protein secondary structure
conformations and associated hydrophobicity scales". J. Math. Chem. 14,
35-45 (1993).
34. D. Juretic, B. Lucic and N. Trinajstic, "Predicting membrane protein
secondary structure. Preference functions method for finding optimal
conformational preferences". Croatica Chemica Acta 66, 201-208 (1993).
35. D. Juretic, "Hydrophobicity preferences and secondary structure
prediction for membrane proteins". Acta Pharmaceutica 43, 223-226 (1993).
36. D. Juretic , R. W. Hendler, F. Kamp, W. S. Caughey, M. Zasloff and H.
V.Westerhoff, "Magainin oligomers reversibly dissipate membrane potential
in cytochrome oxidase liposomes". Biochemistry 33, 4562-4570 (1994).
37. D. Juretic , B. Lucic and N. Trinajstic , "Secondary structure
prediction quality for naturally occurring amino acids in soluble
proteins". Journal of Molecular Structure (Theochem) 338, 43-50 (1995).
38. D. Juretic and R. Pesic , "A scale of á-preferences for
structure-activity predictions in soluble proteins". Croatica Chemica Acta
68, 215-232 (1995).
39. H.V. Westerhoff, M. Zasloff, J.L. Rosner, R.W. Hendler, A.De Wall, A Vaz
Gomez, A.P.M. Jongsma, A. Riethorst and D. Juretic, "Functional synergism
of the magainins PGLa and magainin-2 in Escherichia coli, tumor cells and
liposomes". Eur. J. Biochem. 228, 257-264 (1995).
40. B. Lucic , S. Nikolic , N. Trinajstic , A. Juric and D. Juretic, "A
novel QSPR approach to physicochemical properties of the alpha-amino
acids". Croatica Chemica Acta 68, 435-450 (1995).
41. B. Lucic , S. Nikolic , N. Trinajstic and D.Juretic , "On the
selection of optimum descriptors for structure-property modeling", Journal
of Chemical Information and Computer Science 35, 532-538 (1995).
42. B. Lucic, N.Trinajstic, and D. Juretic, "From protein sequence to
conformation I". (in Croatian). Polimeri 17(3), 119-128 (1996).
43. B. Lucic, N. Trinajstic, and D. Juretic, '' Recognition of membrane protein
structure from amino acid sequence.'' p. 117-158 in "From Chemical
Topology to Three-Dimensional Geometry " (Edited by Balaban, A.T) Plenum
Publishing Corporation, New York, (1997).
44. D. Juretic, B. Lucic, D. Zucic and N. Trinajstic, '' Protein transmembrane
structure: recognition and prediction by using hydrophobicuty scales through
preference functions.'' p. 405-445 in "Theoretical and Computational
Chemistry ", Vol 5. Theoretical Organic Chemistry (Edited by Parkanyi,
C.), Elsevier Science, Amsterdam, (1998).
45. D. Juretic, "Bioenergetics: Work of Membrane Proteins" (in
Croatian), Informator, Zagreb (1997).
46. D. Juretic, D. Zucic, B. Lucic and N. Trinajstic, " Preference
functions for prediction of membrane-buried helices in integral membrane
proteins." Computers and Chemistry 22, 279-294 (1998).
47. D. Juretic and A. Lucin, " The preference functions method for
predicting helical turns with membrane propensity. " Journal of Chemical
Information and Computer Sciences 38, 575-585 (1998).
48. D. Juretic, A. Jeroncic and D. Zucic, "Sequence analysis of membrane
proteins with the web server SPLIT". Croatica Chemica Acta 72, 975-997
(1999).
49. D. Juretic, A. Jeroncic and D. Zucic, "Prediction of initiation sites
for protein folding with helix preferences". Periodicum Biologorum 101,
339-347 (1999).
50. D. Juretic, L. Zoranic and D. Zucic: "Basic charge clusters and
predictions of membrane protein topology". J. Chem. Inf. Coput. Sci. 42,
620-632 (2002).
51. D.Juretic, Comment on " "Minimum
entropy production in photosynthesis", BioComplexity, 2003.
52. D.Juretic and P. Zupanovic: "Photosynthetic
Models with Maximum Entropy Production in Irreversible Charge Transfer
Steps" , Comp. Biol. Chem. 27,541-553(2003).
53. Damir Zucic, and Davor Juretic: "Precise Annotation of
Transmembrane Segments with Garlic – a Free Molecular Visualization
Program" Croatica Chemica Acta77 (1–2) 397-401 (2004)
54. Pasko Zupanovic and Davor Juretic: "The Chemical Cycle
Kinetics Close to the Equilibrium State and Electrical Circuit Analogy"
Croatica Chemica Acta 77 (4) 561-571 (2004).
55. Pasko Zupanovic , Davor Juretic and Srecko Botric: "Kirchhoff’s loop law and the maximum
entropy production principle" Physical Review E 70, 056108 (2004).
56. Davor Juretic, Bono Lucic and Nenad Trinajstic: "Why focusing on
bioinformatics?" Periodicum Biologorum vol. 107, No 4, 379–383, 2005
57. D. Juretic and P. Zupanovic: “The free-energy transduction and entropy
production in initial photosynthetic reactions” in Non-equilibrium
Thermodynamics and the Production of Entropy, Eds. A. Kleidon i R.D.
Lorenz,Springer,-Verlag, Berlin (2005); pp. 161-171.
58. Pasko Zupanovic, Davor Juretic and Srecko Botric: "On the equivalence between Onsager’s
principle of the least dissipation of energy and maximum entropy production
principle. Conduction of heat in an anisotropic crystal." FIZIKA A 14
1, 89–96,(2005)
59. Srećko Botrić, Paško Županović and Davor Juretić: "Is the Stationary
Current Distribution in a Linear Planar Electric Network Determined by the
Principle of Maximum Entropy Production" Croatica Chemica Acta 78 (2)
181-184 (2005).
60. Roderick C. Dewar, Davor Juretić and Paško Županović: “The functional design of the rotary enzyme ATP synthase
is consistent with maximum entropy production” Chemical Physics Letters
430, 177-182 (2006).
61. Paško Županović, Srećko Botrić and Davor Juretić: “Relaxation Processes, MaxEnt
Formalism and Einsten’s Formula for the Probability of Fluctations”
Croatica Chemica Acta 79 (3), 335-338 (2006).
62. Davor Juretić, Damir Vukičević, Nada Ilić, Nikolinka
Antcheva and Alessandro Tossi: “
Computational Design of Highly Selective Antimicrobial Peptides” J. Chem.
Inf. Model. 49, 2873-2882 (2009).
63. Paško Županović, Milan Brumen, Marko Jagodič and Davor
Juretić: “ Bacterial chemotaxis and entropy
production” Philosophical Transactions of the Royal Society B 365,
1397-1403 (2010).
64. Paško Županović, Srećko Botrić, Davor Juretić and
Domagoj Kuić: “ Relaxation
Processes and the Maximum Entropy Production Principles” Entropy 12,
473-479 (2010).
65. Paško Županović, Domagoj Kuić, Davor Juretić and Andrej
Dobovišek: “ On the Problem of
Formulating Principles in Nonequilibriumk Thermodynamics” Entropy 12,
926-931 (2010).
66. Paško Županović, Domagoj Kuić, Željana
Bonačić-Lošić, Dražen Petrov, Davor Juretić and Milan
Brumen: “The Maximum Entropy Production
Principle and Linear Irreversible Processes” Entropy 12, 996-1005 (2010).
67. Andrej Dobovišek, Paško Županović, Milan Brumen,
Željana Bonačić-Lošić, Domagoj Kuić, and Davor Juretić:
“Enzyme
kinetics and the maximum entropy production principle“ Biophysical
Chemistry 154, 49-55 (2011).
68. Davor Juretić, Damir Vukičević, Dražen
Petrov, Mario Novković, Viktor Bojović, Bono Lučić, Nada
Ilić and Alessandro Tossi: “Knowledge-based
computational methods for identifying or designing novel, non-homologous
antimicrobial peptides“. Eur. Biophys. J. 40, 371-385 (2011).